Showing posts with label HARKing. Show all posts
Showing posts with label HARKing. Show all posts

Saturday, 27 August 2022

Exploratory hypothesis tests can be more compelling than confirmatory hypothesis tests

Researchers often distinguish between:

(1) Exploratory hypothesis tests - unplanned tests of post hoc hypotheses that may be based on the current results, and

(2) Confirmatory hypothesis tests - planned tests of a priori hypotheses that are independent from the current results

This distinction is supposed to be useful because exploratory results are assumed to be more “tentative” and “open to bias” than confirmatory results. In this recent paper, we challenge this assumption and argue that exploratory results can be more compelling than confirmatory results.

Our article has three parts. In the first part, we demonstrate that the same data can be used to generate and test a hypothesis in a transparently valid manner. We agree that circular reasoning can invalidate some exploratory hypothesis tests. However, circular reasoning can be identified by checking the contents of the reasoning without knowing the timing of that reasoning (i.e., a priori or post hoc).

Figure 1. An illustration of two ways in which exploratory data analyses may provide legitimate support for post hoc hypotheses


In the second part of our article, we argue that exploratory hypothesis tests can have several evidential advantages over confirmatory tests and, consequently, they have the potential to deliver more compelling research conclusions. In particular, exploratory hypothesis tests:

✅ avoid researcher commitment and prophecy biases

✅ reduce the motive for data fraud

✅ are more appropriate following unplanned deviations

✅ facilitate inference to the best explanation

✅ allow peer reviewers to contribute to exploratory analyses

Finally, in the third part of our article, we consider several potential *disadvantages* of exploratory hypothesis tests and conclude that these potential disadvantages may not be problematic. In particular, exploratory hypotheses tests are not necessarily disadvantaged due to:

✅overfitting

✅bias

✅HARKing

✅unacceptable research practices

And they:

✅are usually necessary

✅can be falsified

✅can predict anything but may suffer an evaluative cost in doing so

To be clear, our claim is not that exploratory hypothesis tests are always more compelling than confirmatory tests or even that they are typically more compelling. Our claim is only that exploratory tests can be more compelling in specific research situations. More generally, we encourage researchers to evaluate specific tests and results on a case-by-case basis rather than to follow simplistic heuristics such as “exploratory results are more tentative,” which represents a form of methodolatory.

Our paper builds on some of my previous work on preregistration and HARKing. And please check out Szollosi and Donkin’s (2021) paper on “the misguided distinction between exploratory and confirmatory research.”


For more info, please see our open access article:

Rubin, M., & Donkin, C. (2022). Exploratory hypothesis tests can be more compelling than confirmatory hypothesis tests. Philosophical Psychology. https://doi.org/10.1080/09515089.2022.2113771

Sunday, 20 September 2020

Does Preregistration Improve the Interpretablity and Credibility of Research Findings?

Preregistration entails researchers registering their planned research hypotheses, methods, and analyses in a time-stamped document before they undertake their data collection and analyses. This document is then made available with the published research report in order to allow readers to identify discrepancies between what the researchers originally planned to do and what they actually ended up doing. In a recent article (Rubin, 2020), I question whether this historical transparency facilitates judgments of credibility over and above what I call the contemporary transparency that is provided by (a) clear rationales for current hypotheses and analytical approaches, (b) public access to research data, materials, and code, and (c) demonstrations of the robustness of research conclusions to alternative interpretations and analytical approaches.
Historical Transparency
My article covers issues such as HARKing, multiple testing, p-hacking, forking paths, exploratory analyses, optional stopping, researchers’ biases, selective reporting, test severity, publication bias, and replication rates. I argue for a nuanced approach to these issues. In particular, I argue that only some of these issues are problematic, and only under some conditions. I also argue that, when they are problematic, these issues can be identified via contemporary transparency per se.
Questionable Research Practices
I conclude that preregistration’s historical transparency does not facilitate judgments about the credibility of research findings when researchers provide contemporary transparency. Of course, in many cases, researchers do not provide a sufficient degree of contemporary transparency (e.g., no open research data or materials), and in these cases preregistration’s historical transparency may provide some useful information. 
However, I argue that historical transparency is a relatively narrow, researcher-centric form of transparency because it focuses attention on the predictions made by specific researchers at a specific point in time. In contrast, contemporary transparency allows research data to be considered from multiple, unplanned, theoretical and analytical perspectives while maintaining a high degree of research credibility. Hence, I suggest that the open science movement should push more towards contemporary transparency and less towards historical transparency.
Contemporary Transparency

Wednesday, 11 March 2020

The Costs of HARKing: Does it Matter if Researchers Engage in Undisclosed Hypothesizing After the Results are Known?

While no-one's looking, a Texas sharpshooter fires his gun at a barn wall, walks up to his bullet holes, and paints targets around them. When his friends arrive, he points at the targets and claims he’s a good shot (de Groot, 2014; Rubin, 2017b). In 1998, Norbert Kerr discussed an analogous situation in which researchers engage in undisclosed hypothesizing after the results are known or HARKing. In this case, researchers conduct statistical tests, observe their results (bullet holes), and then construct post hoc hypotheses (paint targets) to fit these results. In their research reports, they then pretend that their post hoc hypotheses are actually a priori hypotheses. This questionable research practice is thought to have contributed to the replication crisis in science (e.g., Shrout & Rodgers, 2018), and it provides part of the rationale for researchers to publicly preregister their hypotheses before they conduct their analyses (Wagenmakers et al., 2012). In a recent BJPS article (Rubin, 2019), I discuss the concept of HARKing from a philosophical standpoint and then undertake a critical analysis of Kerr’s 12 potential costs of HARKing.



Source: Dirk-Jan Hoek. https://www.flickr.com/photos/23868780@N00/7374874302


I begin my article by noting that scientists do not make absolute, dichotomous judgements about theories and hypotheses being “true” or “false.” Instead, they make relative judgements about theories and hypotheses being more or less true that other theories and hypotheses in accounting for certain phenomena. These judgements can be described as estimates of relative verisimilitude (Cevolani & Festa, 2018).

I then note that a HARKer is obliged to provide a theoretical rationale for their secretly post hoc hypothesis in the Introduction section of their research report. Despite being secretly post hoc, this theoretical rationale provides a result-independent basis for an initial estimate of the relative verisimilitude of the HARKed hypothesis. (The rationale is "result-independent" because it doesn't formally refer to the current result. If it did, then the rationale's post hoc status would no longer be a secret!) The current result can then provide a second, epistemically independent basis for adjusting this initial estimate of verisimilitude upwards or downards (for a similar view, see Lewandowsky, 2019; Oberauer & Lewandowsky, 2019). Hence, readers can estimate the relative verisimilitude of a HARKed hypothesis (a) without taking the current result into account and (b) after taking the current result into account, even if they have been misled about when the researcher deduced the hypothesis. Consequently, readers can undertake a valid updating of the estimated relative verisimilitude of the hypothesis even though, unbeknowst to them, it has been HARKed. Importantly, there's no “double-counting” (Mayo, 2008), “circular reasoning” (Nosek et al., 2018), or violation of the use novelty principle here (Worrall, 1985, 2014), because the current result has not been used in the formal theoretical rationale for the HARKed hypothesis. Consequently, it's legitimate to use the current result to change (increase or decrease) the initial estimate of the relative verisimilitude of that hypothesis.

To translate this reasoning to the Texas sharpshooter analogy, it's necessary to distinguish HARKing from p-hacking. If our sharpshooter painted a new target around his stray bullet hole but retained his substantive claim that he's “a good shot,” then he'd be similar to a researcher who conducted multiple statistical tests and then selectively reported only those results that supported their original a priori substantive hypothesis. Frequentist researchers would call this researcher a “p-hacker” rather than a HARKer (Rubin, 2017b, p. 325; Simmons et al., 2011). To be a HARKer, researchers must also change their original a priori hypothesis or create a totally new one. Hence, a more appropriate analogy is to consider a sharpshooter who changes both their statistical hypothesis (i.e., paints a new target around their stray bullet hole) and their broader substantive hypothesis (their claim). Let's call her Jane!

Jane initially believes “I’m a good shot” (H1). However, after missing the target that she was aiming for (T1), she secretly paints a new target (T2) around her bullet hole and declares to her friends: "I'm a good shot, but I can't adjust for windy conditions. I aimed at T1, but there was a 30 mph easterly cross-wind. So, I knew I'd probably hit T2 instead." In this case, Jane has generated a new, post hoc hypothesis (H2) and passed it off as an a priori hypothesis. Note that, unlike our original Texas sharpshooter, Jane isn't being deceptive about her procedure here (i.e., what she actually did): It's true that she aimed her gun at T1. She's only being deceptive about the a priori status of H2, which she secretly developed after she missed T1 (i.e., she's HARKing). Importantly, however, Jane's deception doesn't prevent her friends from making a valid initial estimate of the verisimilitude of her HARKed hypothesis and then updating this estimate based on the location of her bullet hole:

"We know that Jane's always trained indoors. So, it makes sense that she hasn't learned to adjust for windy conditions. We also know that (a) Jane was aiming at T1, and (b) there was a 30 mph easterly cross-wind. Our calculations show that, if someone was a good shot, and they were aiming at T1, but they didn't adjust for an easterly 30 mph cross-wind, then their bullet would hit T2's location. So, our initial estimated verismilitude for H2 is relatively high. The evidence shows that Jane's bullet did, in fact, hit T2. Consequently, we can tentatively increase our support for H2: Jane appears to be a good shot who can't adjust for windy conditions. Of course, we'd also want to test H2 again by asking Jane to hit targets on both windy and non-windy days!"

We can predict the location of the sharpshooter's bullet hole on the basis of her (secretly HARKed) hypothesis that she is a good shot but cannot adjust for windy conditions. We can then use the location of the bullet hole to increase or decrease our estimated relative verisimilitude for this prediction. Source: https://pixabay.com/photos/woman-rifle-shoot-gun-weapon-2577104/
The second part of my paper provides a critical analysis of Kerr’s (1998) 12 costs of HARKing. For further information, please see:
Rubin, M. (2022). The costs of HARKing. The British Journal for the Philosophy of Science, 73. https://doi.org/10.1093/bjps/axz050 *Publisher’s free access* *Self-archived version*
References
Cevolani, G., & Festa, R. (2018). A partial consequence account of truthlikeness. Synthesehttp://dx.doi.org/10.1007/s11229-018-01947-3
de Groot, A. D. (2014). The meaning of “significance” for different types of research (E. J. Wagenmakers, D. Borsboom, J. Verhagen, R. Kievit, M. Bakker, A. Cramer, . . . H. L. J. van der Maas). Acta Psychologica, 148, 188–194. http://dx.doi.org/10.1016/j.actpsy.2014.02.001
Kerr, N. L. (1998). HARKing: Hypothesizing after the results are known. Personality and Social Psychology Review, 2, 196-217. http://dx.doi.org/10.1207/s15327957pspr0203_4
Lewandowsky, S. (2019). Avoiding Nimitz Hill with more than a little red book: Summing up #PSprereg. https://featuredcontent.psychonomic.org/avoiding-nimitz-hill-with-more-than-a-little-red-book-summing-up-psprereg/
Mayo, D. G. (2008). How to discount double-counting when it counts: Some clarifications. The British Journal for the Philosophy of Science, 59, 857–879.
Nosek, B. A., Ebersole, C. R., DeHaven, A. C., & Mellor, D. T. (2018). The preregistration revolution. Proceedings of the National Academy of Sciences, 115, 2600-2606. http://dx.doi.org/10.1073/pnas.1708274114
Oberauer, K., & Lewandowsky, S., (2019). Addressing the theory crisis in psychology. Psychonomic Bulletin & Reviewhttp://dx.doi.org/10.3758/s13423-019-01645-2
Rubin, M. (2017a). An evaluation of four solutions to the forking paths problem: Adjusted alpha, preregistration, sensitivity analyses, and abandoning the Neyman-Pearson approach. Review of General Psychology, 21, 321-329. http://dx.doi.org/10.1037/gpr0000135 *Self-archived version*
Rubin, M. (2017b). When does HARKing hurt? Identifying when different types of undisclosed post hoc hypothesizing harm scientific progress. Review of General Psychology, 21, 308-320. http://dx.doi.org/10.1037/gpr0000128 *Self-archived version*
Shrout, P. E., & Rodgers, J. L. (2018). Psychology, science, and knowledge construction: Broadening perspectives from the replication crisis. Annual Review of Psychology, 69, 487-510. http://dx.doi.org/10.1146/annurev-psych-122216-011845
Simmons, J. P., Nelson, L. D., & Simonsohn, U. (2011). False-positive psychology: Undisclosed flexibility in data collection and analysis allows presenting anything as significant. Psychological Science, 22, 1359–1366. http://dx.doi.org/10.1177/0956797611417632
Wagenmakers, E. J., Wetzels, R., Borsboom, D., van der Maas, H. L., & Kievit, R. A. (2012). An agenda for purely confirmatory research. Perspectives on Psychological Science, 7, 632-638. http://dx.doi.org/10.1177/1745691612463078
Worrall, J. (1985). Scientific discovery and theory-confirmation. In J. C. Pitt (Ed.), Change and progress in modern science: Papers related to and arising from the Fourth International Conference on History and Philosophy of Science (pp. 301–331). Dordrecht, the Netherlands: Reidel. http://dx.doi.org/10.1007/978-94-009-6525-6_11
Worrall, J. (2014). Prediction and accommodation revisited. Studies in History and Philosophy of Science, 45, 54–61. http://dx.doi.org/10.1016/j.shpsa.2013.10.001